Surveillance

  • Posted: February 8th, 2012 - 11:13pm by Doug Powell

    A new report says Canadians suffer more foodborne illness than Americans, that most of it happens with restaurant meals, and that consumers are sorta dumb too.

    Unfortunately, the report relies heavily on other reports that are not peer-reviewed, assumptions, and suffers from highly selective referencing to make a point – and I have no idea what that point is.

    The report, Improving Food Safety in Canada: Toward a More Risk Responsive System, released by the Conference Board of Canada to coincide with their food safety conference and upstaged by Galen Weston Jr.’s comments that farmer’s markets were going to kill someone, says half or more of all cases of foodborne illnesses in Canada are picked up in restaurants or from other food service providers.

    Daniel Munro, Principal Research Associate, said, “It is commonly assumed that farms and food processing companies hold the most responsibility for ensuring safe food, and their role is critical. But most foodborne illnesses are associated with the preparation and storage practices of restaurants, food service operations, and consumers themselves.”

    I’m not sure who makes that assumption. It is estimated there are 6.8 million cases of food-borne illness annually in Canada.

    Part of the problem can be traced to restaurant inspection systems that are seen as too sporadic to have an impact on restaurants’ day-to-day food safety practices.

    Garth Whyte, president and CEO of the Canadian Restaurant and Foodservices Association dismissed the report describing it as "shockingly short on facts."

    "This study did not even bother contacting us about what we are doing, and if they had, they would know that there are three government recognized food safety training programs that train tens of thousands food handlers per year," Whyte said.

    Except training alone doesn’t do much for food safety behavior.

    The report provides a number of recommendations to improve Canada’s food safety system including providing restaurants and other food service providers with timely information and advice on how they can minimize food safety risks.

    We call them infosheets.

    It also urges governments to build on current consumer awareness initiatives by engaging consumers directly in discussions about food safety in their households.

    The report offers no advice on how to do that.

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  • Posted: February 3rd, 2012 - 5:58am by Doug Powell

    Health Protection Scotland (HPS) said it had recorded 253 positive cases of E. coli during 2011, up from 212 the previous year.

    The agency blamed the increase on a UK-wide outbreak believed to have originated from contaminated vegetables. The outbreak, between December 2010 and July 2011, saw 250 cases of E. coli infection throughout England, Wales and Scotland and 74 victims treated in hospital.

    A subsequent investigation pointed to a possible link between leeks and potatoes bought loose and prepared in the home.

    However, the HPS report also noted that the apparent spike in E. coli between 2010 and 2011 was partly due to the unusually low rate of E. coli infection in 2010.

    The report also noted decreases in salmonella and campylobacter.
    In 2011, HPS received reports of 736 cases of salmonella infection – a decrease of almost 22% on the 941 reported in 2010.

    Cases of campylobacter were also down 3.6% to 6366 last year, although the figure remains "one of the highest on record."

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  • Posted: September 8th, 2011 - 8:18pm by Doug Powell

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    The US. Centers for Disease Control reported today that in 2008, 1,034 foodborne disease outbreaks were reported, which resulted in 23,152 cases of illness, 1,276 hospitalizations, and 22 deaths. Among the 479 outbreaks with a laboratory-confirmed single etiologic agent reported, norovirus was the most common, accounting for 49% of outbreaks and 46% of illnesses. Salmonella was the second most common, accounting for 23% of outbreaks and 31% of illnesses. Among the 218 outbreaks attributed to a food vehicle with ingredients from only one of 17 defined food commodities, the top commodities to which outbreaks were attributed were poultry (15%), beef (14%), and finfish (14%), whereas the top commodities to which outbreak-related illnesses were attributed were fruits and nuts (24%), vine-stalk vegetables (23%), and beef (13%).

    Since 1992, CDC has defined a foodborne disease outbreak as the occurrence of two or more similar illnesses resulting from ingestion of a common food. State, local, and territorial health department officials use a standard, Internet-based form to voluntarily submit reports of foodborne outbreaks to CDC. An online toolkit of clinical and laboratory information is available to support investigation and reporting of outbreaks.

    The number (1,034) of outbreaks was 10% lower than the annual average reported (1,151) for 2003--2007, and the number of outbreak-related illnesses was 5% lower (23,152 versus 24,400).

    Of the total number of outbreak-related foodborne illnesses, 1,276 (6%) resulted in hospitalization. Salmonella was the most common cause of outbreak-related hospitalizations, causing 62% of hospitalizations reported, followed by Shiga toxin--producing Escherichia coli (STEC) (17%) and norovirus (7%). Outbreaks caused by Clostridium botulinum resulted in the highest proportion of persons hospitalized (90%), followed by Listeria outbreaks (76%). Among the 22 deaths associated with foodborne disease outbreaks in 2008, 20 were attributed to bacterial etiologies (13 Salmonella, three Listeria monocytogenes, three STEC [two O157, one O111], one Staphylococcus), one to norovirus, and one to a mycotoxin.

    Among the 868 outbreaks with a known single setting where food was consumed, 52% resulted from food consumed in a restaurant or deli, 15% in a private home, and the remainder in other locations.

    Ref: Surveillance for foodborne disease outbreaks --- United States, 2008. Morbidity and Mortality Weekly Report, September 9, 2011 / 60(35); 1197-1202.

     

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  • Posted: July 2nd, 2011 - 5:58pm by Doug Powell

    Julie Steenhuysen of Reuters reports that when a patient in Uganda fell ill with Ebola virus last month, the advice of U.S. disease experts helped local officials contain its spread.

    "You didn't read about it in the papers because for the first time ever we identified a single case, not an outbreak," said Thomas Frieden, director of the U.S. Centers for Disease Control and Prevention.

    The Atlanta-based CDC is expanding its involvement in cases of illness overseas, from helping track the source of the highly toxic E. coli outbreak in Germany to homing in on the cause of cholera in the aftermath of Haiti's earthquake.

    Frieden said during a tour of CDC headquarters in Atlanta that CDC has more than 50 staff members in outposts around the world, replicating a program it first implemented at home to teach state health authorities how to best contain outbreaks.

    He was reluctant to criticize Germany's handling of the recent E. coli outbreak, the deadliest ever recorded, which has sickened 4,000 people.

    But Frieden said the United States recently had a small, three-state outbreak of the more common E. coli 0157:H7, part of a class of bacteria known as Shiga toxin-producing Escherichia coli, or STEC. The E. coli strain that caused the German outbreak was also in this class.

    "There were just a tiny handful of cases, but because we do DNA fingerprinting, we knew they were linked and we very quickly identified hazelnuts as the source and had them pulled," Frieden said.

    As a result, there were just eight cases in the United States. "That type of system is very important," Frieden said.
     

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  • Posted: April 15th, 2010 - 1:16pm by Doug Powell

    I finished our U.S. taxes early this morning and filed before the April 15 deadline.

    Amy wasn’t taking advantage of our full deductions, so I pompously declared I would do the taxes this year – my first time filing in the U.S. – and then of course waited until the last day to file.

    They’re done, at least until we get audited, so it’s back to foodborne illness and the annual FoodNet data which is awesome because it provides an annual snapshot, and sucks because it shows nothing is changing.

    All the talk in Washington, all the outbreaks, all the Pulitzer-prize winning media coverage, all the ridiculously boring coverage of so-called foodborne illness in the vanity presses by those who can afford them and … the incidence of foodborne illness isn’t changing. So maybe it’s time to do something different.

    In 2009, a total of 17,468 laboratory-confirmed cases of infection were identified. In comparison with the first 3 years of surveillance (1996--1998), sustained declines in the reported incidence of infections caused by Campylobacter, Listeria, Salmonella, Shiga toxin-producing Escherichia coli (STEC) O157, Shigella, and Yersinia were observed. The incidence of Vibrio infection continued to increase. Compared with the preceding 3 years (2006--2008), significant decreases in the reported incidence of Shigella and STEC O157 infections were observed. For most infections, reported incidence was highest among children aged <4 years; the percentage of persons hospitalized and the case fatality rate (CFR) were highest among persons aged ≥50 years. In 2009, the Healthy People 2010 target of ≤1.0 case per 100,000 population for STEC O157 infection (objective 10-1b) was met (2). Further collaborative efforts with regulatory agencies and industry are needed to sustain and extend recent declines and to improve prevention of foodborne infections.

    Maybe someone should take leadership and stop gassing on about collaboration.

    \

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  • Posted: March 1st, 2010 - 5:48pm by Doug Powell

    Does the majority of foodborne illness really happen in the home?

    The statement is repeatedly repeated, but usually with no supporting data.

    A story most recently proclaimed, “More than 50 percent of foodborne illnesses come from food prepared in the home.”

    There was no reference.

    The stats that have been reported in peer-reviewed journals are all over the place: anywhere from 15-90 per cent of foodborne illness apparently happens in the home.

    So if a consumer ate bagged spinach in fall 2006 at home, would that mean they possibly got sick at home, or that the contamination originated on the farm and there was little consumers could do?

    Casey Jacob and I attempted to tackle this question in the journal, Foodborne Pathogens and Disease, and concluded,

    “Rather than focusing on the location of consumption—and blaming consumers and others—analysis of the steps leading to foodborne illness should center on the causes of contamination in a complex farm-to-fork food safety system.”

    Robert Tauxe of the U.S. Centers for Disease Control noted in a recent talk there have been 10 new food vehicles indentified in multistate outbreaks of foodborne illness since 2006: bagged spinach, carrot juice, peanut butter, broccoli powder on a snack food, dog food, pot pies, canned chili sauce, hot peppers, white pepper and raw cookie dough.

    Few, if any of these have to do with consumers.
     

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  • Posted: January 27th, 2010 - 11:55am by Doug Powell

    In May 2008, a couple of Canadian researchers at the University of Regina put out a report that ostensibly attempted to rank 17 industrialized countries based on their food safety performance.

    And who doesn’t love a completely meaningless top-17 list, that placed Canada fifth, the U.S. seventh and the United Kingdom first. Make mine piping hot.

    Dr. Richard Holley of the University of Manitoba takes a different approach in the current Canadian Medical Association Journal, asserting that Canada's food safety system is reactive, lags behind other countries, and investment is needed to ensure it can adequately protect Canadians.

    I’ll go with Holley.

    Foodborne illness surveillance is needed to ensure safety from gastrointestinal infections caused by bacteria such as toxigenic E.coli, Salmonella, Campylobacter and Listeria. As there is no national foodborne illness surveillance program in Canada, the estimated 11 million cases of foodborne illness every year are based on surveys of self-reported gastrointestinal illness. More accurate data are needed to execute meaningful intervention.

    European Union countries, the US and Australia have surveillance systems that allow them to collect information on food vehicles and organisms that cause foodborne illness, something Canada cannot currently do. Canada's multi-government system with national, provincial and local governments that share responsibility for health, as well as monitor the safety and quality of food are key reasons that we have a fragmented system with poor focus. The US suffers from the same problem, yet does a better (though not perfect) job.

    Steps to food safety in Canada:

    1. Government must go beyond interagency memoranda of understanding to develop permanent systems that promote cooperation and sharing of information on surveillance of foodborne illness and investigations of outbreaks.

    2. Investment is needed to develop a surveillance program on foodborne illness that will characterize risks related to food and food pathogens in Canada.

    3. Data from surveillance must be used to develop inspection policy that is based on risk and is uniform across the coun- try. That policy’s main priority must be to validate that approved food safety systems are operated properly.

     

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  • Posted: January 8th, 2010 - 12:00am by Doug Powell

    Author: 
    Doug Powell

    The Public Health Agency of Canada, which was created to streamline various public health duties like providing meaningful data on foodborne illness and provide leadership on public health issues (totally useless during the 2008 listeria in deli meats outbreak that killed 22) has gotten around to releasing so-called integrated surveillance data for selected enteric diseases in Canada.

    This report focuses on the years 2000 to 2004. The pathogens described are Salmonella, Campylobacter, verotoxigenic Escherichia coli and Shigella. From 2000 to 2004, a general decline in reported rates of all four pathogens was observed in all except a few provinces. When looking at more long-term trends from 1995 to 2004, a similar decline was seen in nationally reported rates for all four pathogens. S. Typhimurium was the most frequently reported Salmonella serovar during the five-year period described, followed by S. Heidelberg and S. Enteritidis. C. jejuni remained the most prevalent Campylobacter species reported between 2000 and 2004. E. coli O157 comprised the majority of verotoxigenic E.coli isolates over these five years. Shigella sonnei was the most frequently reported Shigella species.

    Hospitalizations, deaths, outbreaks and case clusters, as well as unusual isolation sites and travel-acquired infections are also explored in this report. Pathogenic E. coli was associated with the highest hospitalization rates over the five-year period, although Salmonella infections resulted in the largest number of deaths overall. Data on outbreaks and case clusters is limited to those reported to the National Enteric Surveillance Program (NESP) and the National Microbiology Laboratory (NML).


    Which means, not much. The data is exceedingly limited, and why it took at least 5 years to report is baffling. Canadians can comfortably go back to sleep.

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  • Posted: December 14th, 2009 - 1:16pm by Ben Chapman

    Following the lead of mash-up artist Girl Talk, the Centre for Molecular Epidemiology led by Professor Frank Møller Aarestrup at Technical University of Denmark (DTU), is planning on creating a infectious disease surveillance tool by combining elements of google maps/pulsenet.  The new tool, nicknamed Google Bacterium, could allow laboratories across the globe to see outbreaks of foodborne illness in almost real-time (as soon as PFGE maps or sequences are uploaded).

    The centre will develop software and hardware solutions which can handle these large volumes of data, analyse DNA sequences and swiftly return clinically, biologically and epidemiologically relevant information on bacteria species, strains, antimicrobial resistance and treatment options as an open source solution.

    The plan is to start with salmonella, staphylococci and coli bacteria – with the potential for expanding the collaboration to also include viruses, parasites and other bacteria. In the long term, the system will also be able to include the identification of ‘good’ bacteria for industrial uses.

    The centre will also develop an Internet platform which will show all the data on a world map to visualise the global spread of bacteria. It will be a bit like a Google Bacterium which will be accessible to everyone on the Internet.

    Sounds awesome, mash it up, I'd love to be able to get email alerts about clusters of illnesses in certain geographic areas.

     

     

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  • Posted: December 7th, 2009 - 7:50pm by Doug Powell

    Tomorrow’s Washington Post has a food safety feature with some relevant history and reminders that get lost in the vitriol of activist politics. Excerpts (some will say cherry picking, go read the article yourself) below.

    Arthur Allen, a Washington writer and the author of "Ripe: The Search for the Perfect Tomato" (March 2010, Counterpoint), writes that whatever our politics, we increasingly eat from a communal kitchen.

    “The increasing number of front-page outbreaks and the high-profile critiques of the food system by such writers as Michael Pollan ("The Omnivore's Dilemma") and Eric Schlosser ("Fast Food Nation") can give the impression that the U.S. food supply is spiraling out of control. But is Americans' food, in fact, more dangerous that it was in the day of home-cooked meals? People who have studied the numbers aren't convinced. …

    “In the mid-1990s, the CDC began bolstering its surveillance of food-borne illness. One result was the ability to measure whether food was becoming more or less safe. Between 1998 and 2004, illnesses reported by CDC that were caused by E. Coli, listeria, campylobacter and a few other bacteria decreased by 25 to 30 percent, perhaps because of improvements in the handling of meat and eggs. Since about 2004, however, the rate of these illnesses has basically remained steady.”


    John Glenn Morris, director of the Emerging Pathogens Institute at the University of Florida at Gainesville, said,

    "It's an ongoing problem, and consumers need to use reasonable caution in terms of food preparation. But it's not a 'go screaming down the hall the world is coming to an end' kind of thing."


    Based on its evolutionary tree, scientists think that O157:H7 probably has existed for hundreds or even thousands of years. But it hadn't been noticed in our food supply until 1982, when a small-town doctor in Oregon reported to the CDC that he'd seen a group of patients with bloody diarrhea. Another group got sick with the same symptoms in Michigan a little later. All had eaten hamburgers at McDonald's, said Michael Doyle, director of the Food Safety Center at the University of Georgia (left, exactly as shown).

    McDonald's hired Doyle to help fix the problem, and he told company officials that one way to be sure to kill O157:H7 was by heating their hamburgers to at least 155 degrees. McDonald's officials grumbled that they would lose customers, but they did what he told them, Doyle says. At the time, FDA guidelines recommended heating to 140 degrees.

    Most other hamburger chains kept cooking at lower temperatures in order to produce juicier burgers that attracted customers who didn't like the "hockey pucks" being served at McDonald's. That continued until 1993, when Jack-in-the-Box reaped the consequences of looking the other way -- crippling lawsuits, bankruptcy, $160 million in losses.

    But the O157:H7 seems to be out of the barn -- and into the pasture. … studies have shown that "natural," grass-fed cattle are now also likely to carry it. In the Earthbound Farm case, genetic fingerprinting indicated that the spinach had been contaminated with bacteria carried by cattle that ranged on land nearby.


    Centralization doesn't necessarily mean less-safe food. A well-run centralized industry is arguably easier to police and control than a more decentralized one. For example, a handful of companies produce most of the 12 million tons of tomato paste that makes its way into pizza and spaghetti sauces, ketchup, salsas and other products. This industry's record is very clean, in terms of contamination.

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